1.2. Data for the course

In this course, we will build a simple pipeline that starts from FastQ files.

We will use a data set made of 4 samples sequenced on a ISeq100 Illumina sequencer. The data is paired meaning you will manipulate 8 files. Those samples are Covid-based data that were acquired at the beginning of the pandemia (in March 2020). The data size is about 25Mb.

A temporary link is available here:

http://dl.pasteur.fr/fop/B00ew04J/fastq_files.tar.gz

Warning

This data was generated at the Biomics platform . Would you need to publish results with this data, please contact the biomics platform (biomics@pasteur.fr).