6. Workflows

• 6.1. Nextflow
  • 6.1.1. Install Nextflow
  • 6.1.2. Example of a nexflow workflow (see the project)
  • 6.1.3. Example of a Nextflow workflow
  • 6.1.4. Run the workflow
  • 6.1.5. Documentation
  • 6.1.6. Exercise 1
  • 6.1.7. Exercise 2
• 6.2. Snakemake
  • 6.2.1. Exercice 0: execution
  • 6.2.2. Exercice 1 : expand
  • 6.2.3. Exercice 2 (deal with error)
  • 6.2.4. Exercice 3 (deal with error)
  • 6.2.5. Exercice 4 (benchmark)
  • 6.2.6. Exercice 5 (project)
  • 6.2.7. Solution Exercice1 (deal with error)